{"query": "Base pairing and the central dogma", "count": 17, "results": [{"id": "card_n_77d37f00f1dd", "title": "Base pairing and the central dogma", "shelf": "science", "surface": "secular", "snippet": "The information flows DNA -> RNA -> protein (Crick's central dogma), and it is held by\ncomplementary pairs: A binds T with two hydrogen bonds, G binds C with three. Chargaff's rule\n(that A=T and G=C i", "authority_tier": "engine_derived", "source": "Concordance assay — 2026-07-09", "generated": false}, {"id": "card_theory_dna_structure", "title": "The double helix (structure that explains its own copying)", "shelf": "theories", "surface": "secular", "snippet": "The double helix (structure that explains its own copying) — an engine domain that can touch it: genetics. Calibration: seals — base-pair ratios, melting temperatures and complement sequences compute.", "authority_tier": "reference", "source": "The Theory Assay — calibrated, not judged (docs/THEORY_CATALOG.md)", "generated": false}, {"id": "card_c_7ae00e773868", "title": "Base pairing and the central dogma ↔ The genetic code — a language written in a m", "shelf": "connections", "surface": null, "snippet": "The information flows DNA -> RNA -> protein (Crick's central dogma), and it is held by complementary pairs  — a concord the card itself states; mined + verified.", "authority_tier": "engine_derived", "source": "Concordance miner — 2026-07-11", "generated": false}, {"id": "card_src_word_pairing", "title": "pairing", "shelf": "dictionary", "surface": "secular", "snippet": "pairing: (noun) the act of pairing a male and female for reproductive purposes — syn: coupling, mating, conjugation, union, sexual union · (noun) the act of grouping things or people in pairs", "authority_tier": "reference", "source": "WordNet 3.0, Princeton University (WordNet License)", "generated": false}, {"id": "card_c_daa6d91adba5", "title": "Agglutination — words as beads on a string ↔ Base pairing and the central dogma", "shelf": "connections", "surface": null, "snippet": "morphemes stack in order, each one crisp and separable, exactly like bases along a DNA strand  — a concord the card itself states; mined + verified.", "authority_tier": "engine_derived", "source": "Concordance miner — 2026-07-11", "generated": false}, {"id": "card_c_afecb53bd0ed", "title": "The genome as information — and the algebra  ↔ Base pairing and the central dogma", "shelf": "connections", "surface": null, "snippet": "the ~3.2 billion base pairs of the human genome hold ~6.4 billion bits  — a concord the card itself states; mined + verified.", "authority_tier": "engine_derived", "source": "Concordance miner — 2026-07-11", "generated": false}, {"id": "card_c_1492955a8768", "title": "Ultraviolet — the first photons that bite ↔ Base pairing and the central dogma", "shelf": "connections", "surface": null, "snippet": "enough to damage DNA directly  — a concord the card itself states; mined + verified.", "authority_tier": "engine_derived", "source": "Concordance miner — 2026-07-11", "generated": false}, {"id": "card_src_pron_pairing", "title": "pairing", "shelf": "pronunciation", "surface": "secular", "snippet": "pairing: pronounced (ARPABET) P EH1 R IH0 NG. From the CMU Pronouncing Dictionary — the standard machine-readable pronunciations of North American English.", "authority_tier": "reference", "source": "CMU Pronouncing Dictionary (cmudict) — BSD-2-Clause, Carnegie Mellon", "generated": false}, {"id": "card_c_07e356d737b0", "title": "The genetic code — a language written in a m ↔ Base pairing and the central dogma", "shelf": "connections", "surface": null, "snippet": "it computed the complement of GATTACA and translated AUG -> Methionine, the universal start.  — a concord the card itself states; mined + verified.", "authority_tier": "engine_derived", "source": "Concordance miner — 2026-07-11", "generated": false}, {"id": "card_alm_connection_watson_crick_is_reversible_code", "title": "Almanac: Watson-Crick complementarity is a reversible code: each strand backs up the other", "shelf": "almanac", "surface": "secular", "snippet": "SITUATION\n  DNA is a double strand for a deep reason: each strand is the exact complement of the other, so the molecule carries its own backup. genetics confirmed the base-pairing -- the complement of", "authority_tier": "reference", "source": "The Almanac — verified-only practical wisdom (sealed)", "generated": false}, {"id": "card_c_8d44dab76587", "title": "Base pairing instantiates the genetic code", "shelf": "connections", "surface": null, "snippet": "The physical carrier of the code.", "authority_tier": "engine_derived", "source": "Concordance assay — 2026-07-09", "generated": false}, {"id": "card_c_e4c0cb3d2e22", "title": "Chemistry is the substrate of the genetic code", "shelf": "connections", "surface": null, "snippet": "Base pairing, the double helix, and translation are chemistry that copies itself.", "authority_tier": "engine_derived", "source": "Concordance assay — 2026-07-09", "generated": false}, {"id": "card_n_0be5414e0c37", "title": "Supersymmetry — pairing as the map's arrangement", "shelf": "concepts", "surface": "secular", "snippet": "Arrange the map so each axis/node has a dual; the symmetry then PREDICTS the missing partner — a broken pair is a gap that tells us what to look for, the way SUSY predicts a superpartner.\n\nHONEST STAT", "authority_tier": "matt", "source": "Operator's seed (Matt) — honest grade: resonance", "generated": false}, {"id": "card_works_genetics", "title": "Reading and mirroring a strand of DNA", "shelf": "the-works", "surface": "secular", "snippet": "A strand's GC content and its reverse complement are fixed by the base-pairing rules — A with T, G with C. Here GGCC is all GC, and ATGC mirrors to GCAT.  Worked & sealed by the engine — GC(GGCC) = 4/", "authority_tier": "verified", "source": "The Works — worked & sealed", "generated": false}, {"id": "card_c_a9e92568df8b", "title": "Two poles — abstract/formal vs material/embo ↔ Supersymmetry — pairing as the map's arrange", "shelf": "connections", "surface": null, "snippet": "The strongest anti-correlations run ACROSS this divide (reasoning <-> physical_substance, reasoning <-> metabolism), NOT within the proposed supersymmetry duals.  — a concord the card itself states; m", "authority_tier": "engine_derived", "source": "Concordance miner — 2026-07-11", "generated": false}, {"id": "card_c_275d2a32f646", "title": "Supersymmetry — pairing as the map's arrange ↔ Two poles — abstract/formal vs material/embo", "shelf": "connections", "surface": null, "snippet": "Held on for the general method (seek complementary structure) and the refined direction the data points to — NOT the stated pairs.  — a concord the card itself states; mined + verified.", "authority_tier": "engine_derived", "source": "Concordance miner — 2026-07-11", "generated": false}, {"id": "card_c_130ff92ca772", "title": "Supersymmetry — pairing as the map's arrange ↔ The periodic table — the map of the elements", "shelf": "connections", "surface": null, "snippet": "the symmetry then PREDICTS the missing partner — a broken pair is a gap that tells us what to look for, the way SUSY predicts a superpartner.  — a concord the card itself states; mined + verified.", "authority_tier": "engine_derived", "source": "Concordance miner — 2026-07-11", "generated": false}]}