The Mechanism · Gated-generation receipt

gen-define-a-frameshift-mutation-and-give-one-short-worked-examp-e55b

stable pending witness
2026-05-29 06:59:28 UTC · anthropic/claude-sonnet-4-5

Prompt

Define a frameshift mutation and give one short worked example.
63 chars

Generation

# Frameshift Mutation ## Definition A **frameshift mutation** is a genetic mutation caused by insertions or deletions (indels) of nucleotides in a DNA sequence that are not in multiples of three. This shifts the reading frame of codons during translation, typically resulting in a completely different and nonfunctional protein downstream of the mutation. ## Worked Example **Original DNA sequence:** ``` DNA: ATG|GAA|CTG|TTC|AAG|TAA mRNA: AUG|GAA|CUG|UUC|AAG|UAA Met-Glu-Leu-Phe-Lys-STOP ``` **After deletion of one nucleotide (A) at position 4:** ``` DNA: ATG|GGA|CTG|TTC|AAG|TAA ↑ deletion occurs here mRNA: AUG|GGA|CUG|UUC|AAG|UAA Met-Gly-Leu-Phe-Lys-STOP ``` Wait, let me correct this: **After deletion of one nucleotide (A) at position 5:** ``` DNA: ATG|GCT|GTT|CAA|GTA|A ↑ 'A' deleted, frame shifts mRNA: AUG|GCU|GUU|CAA|GUA|A Met-Ala-Val-Gln-Val-... ``` The reading frame shifts, producing completely different amino acids from the mutation point onward, usually resulting in a nonfunctional protein or premature stop codon.
19 tokens in · 396 tokens out · 9053 ms · $0.006

The four gates

RED
pass
no disqualifying input patterns detected
FLOOR
pass
output above protective minimum; no mismatches
WAY
pass
no declared way_path (Way check NA); no coercion language
EXECUTION
deferred
no witnesses available (Witness Roll not yet constituted)

Verifier results

scripture_anchors NOT_APPLICABLE
0 Scripture citation(s) extracted
theology_doctrine NOT_APPLICABLE
no doctrine keyword patterns detected

Metrics

Total latency
9060.6 ms
Base LLM
9053.4 ms
Verifiers
0.4 ms
Gates
0.0 ms
Cost
$0.006

Trail

06:59:28 received prompt_chars=63 verifiers=['scripture_anchors', 'theology_doctrine']
06:59:28 red_gate decision=pass reason=no disqualifying input patterns detected
06:59:37 base_llm_call model=anthropic/claude-sonnet-4-5 tokens_in=19 tokens_out=396 latency_ms=9053.4 cost_usd=0.006
06:59:37 verifier:scripture_anchors verdict=NOT_APPLICABLE summary=0 Scripture citation(s) extracted
06:59:37 verifier:theology_doctrine verdict=NOT_APPLICABLE summary=no doctrine keyword patterns detected
06:59:37 floor_gate decision=pass reason=output above protective minimum; no mismatches
06:59:37 way_gate decision=pass reason=no declared way_path (Way check NA); no coercion language
06:59:37 execution_gate decision=deferred reason=no witnesses available (Witness Roll not yet constituted)
06:59:37 signed hash_algo=sha256 hash=sha256:2de33e2e40e52a53bf912ad20fac25b0777e5816bfdf5f7925ad7abf0f33641d

Content hash

sha256:2de33e2e40e52a53bf912ad20fac25b0777e5816bfdf5f7925ad7abf0f33641d

SHA256 over the canonical JSON (excluding this field). Tamper detection. Ed25519 signing planned for v2 once the operator’s signing key is provisioned on disk.

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